HIV uses several routes to escape immune system pressure

Washington, September 19 (ANI): Researchers at the Emory Vaccine Center have shown that HIV relies upon a number of strategies rather than use any preferred escape route to escape immune system pressure.

The human immune system has the ability to temporarily overpower HIV in early infection.

Studies conducted in the recent past have shown that most newly infected patients develop neutralizing antibodies. These are blood proteins that glob onto the virus and would allow patients to defend themselves – if they were facing only one target.

However, the problem occurs when HIV mutates, and disguises itself enough to get away from the antibodies. The virus eventually wears down the immune system into exhaustion.

The Emory team’s findings attain significance as they suggest that even if any scientist succeeds in identifying a vaccine component that can stimulate neutralizing antibodies, HIV’s capacity for rapid mutation could still be a confounding factor.

Dr. Cynthia Derdeyn, associate professor of pathology at Emory University School of Medicine, Emory Vaccine Center and Yerkes National Primate Research Center, says that a single type of neutralizing antibody may not be enough to contain HIV.

“These neutralizing antibodies work really well – they hit the virus fast and hard. But so far, every time we look, the virus escapes,” she says.

During the study, the researchers took blood samples from the participants a few weeks after infection occurred, and then later as two participants’ immune responses continued.

They isolated individual viruses over the first two years of HIV infection, and tested how well the patients’ own antibodies could neutralize them.

“In one patient where we had very early samples, there was evidence that neutralizing antibody came up within weeks, and that’s earlier than what was previously thought,” Derdeyn says.

In both patients, some viruses mutated part of their outer proteins so that after the mutation, an enzyme would be likely to attach a sugar molecule to it.

Though the sugar molecule interferes with antibody attack, this tactic, known as the “glycan shield”, was not observed in all cases.

Other viruses mutated the part of the outer protein that the neutralizing antibodies stick to directly. In both patients, many changes in the virus’ genetic code were necessary for escape.

“We need to understand early events in the immune response if we are going to figure out what a potential vaccine should have in it. What we can show is that even in one patient, several escape strategies are going on,” Derdeyn says.

According to her, that means that in order to be immune to HIV infection, someone may need to have several types of neutralizing antibodies ready to go.

Seeing how the virus mutates will allow researchers to choose the best parts to put in a vaccine, she says.

The results are online and scheduled for publication in the September issue of the journal Public Library of Science Pathogens.(ANI)

Why H1N1 flu spreads from person to person less effectively than other flu viruses

Washington, July 3 (ANI): Scientists in the US have come up with an genetic explanation for why the new H1N1 “swine flu” virus has spread from person to person less effectively than other flu viruses.

A collaborative team of researchers from the Massachusetts Institute of Technology (MIT) and the Centers for Disease Control and Prevention have found that the H1N1 strain, which circled the globe this spring, has a form of surface protein that binds inefficiently to receptors found in the human respiratory tract.

“While the virus is able to bind human receptors, it clearly appears to be restricted,” says Ram Sasisekharan, the Edward Hood Taplin Professor and director of the Harvard-MIT Division of Health Sciences and Technology (HST) and the lead MIT author of the paper.

He points out that that restricted binding, along with a genetic variation in an H1N1 polymerase enzyme, which was first reported about three weeks ago in Nature Biotechnology, explains why the virus has not spread as efficiently as seasonal flu.

However, flu viruses are known to mutate rapidly, so there is cause for concern if H1N1 undergoes mutations that improve its binding affinity.

“We need to pay careful attention to the evolution of this virus,” says Sasisekharan.

For their study, the researchers compared the new H1N1 strain to several seasonal flu strains, including some milder H1N1 strains, and to the virus that caused the 1918 flu pandemic.

They found that the new strain is able to bind to the predominant receptors in the human respiratory tract, known as umbrella-shaped alpha 2-6 glycan receptors.

However, binding efficiency varies between flu strains, and that variation is partly determined by the receptor-binding site (RBS) within the hemagglutinin protein.

The researchers found that the new H1N1 strain’s RBS binds human receptors much less effectively than other flu viruses that infect humans.

They also observed that the new H1N1 strain spreads inefficiently in ferrets, which accurately mimics human influenza disease including how it spreads or transmits in humans.

When the ferrets were in close contact with each other, they were exposed to enough virus particles that infection spread easily. However, when they were kept separate and the virus could spread only through airborne respiratory droplets, the illness spread much less effectively.

Sasisekharan says that this is consistent with the transmission of this virus seen in humans so far, considering that most outbreaks have occurred in limited clusters, sometimes within a family or a school but not spread much further.

“One of the big payoffs of long-term investments in carbohydrate biology and chemistry research is an understanding of the relationships between cell surface carbohydrate structure and viral infectivity. Tools developed in building such understanding help in the response to events like the recent H1N1 outbreak,” said Jeremy M. Berg, director of the National Institute of General Medical Sciences of the National Institutes of Health, which partly funded the research.

The researchers also pinpointed a second mutation that impairs H1N1′s ability to spread rapidly.

While recent studies have shown that a viral RNA polymerase known as PB2 is critical for efficient influenza transmissibility, the new H1N1 strain does not have the version of the PB2 gene necessary for efficient transmission.

A research article describing the study has been published in the online edition of the journal Science. (ANI)